Cryptanalysis

Information

The American Cryptogram Association
http://cryptogram.org/

Cipher Types
http://cryptogram.org/cipher_types.html

Codes, Ciphers, & Codebreaking
http://www.vectorsite.net/ttcode.html

Basic Cryptanalysis
http://www.umich.edu/~umich/fm-34-40-2/

Military Cryptanalysis
http://www.nsa.gov/public_info/declass/military_cryptanalysis.shtml

Code Penguin's Cryptography Archive
http://www.codepenguin.com/category/cryptography/

Handbook of Applied Cryptography
http://cacr.uwaterloo.ca/hac/index.html

List of Free Online Cryptography Books
http://freecomputerbooks.com/specialCryptographyBooks.html

Self-Study Course in Block Cipher Cryptanalysis
https://www.schneier.com/paper-self-study.html

The Cryptanalysis Blues
http://sota.gen.nz/crypt_blues/

Identifying Unknown Ciphers
http://practicalcryptography.com/cryptanalysis/text-characterisation/ide...

CrypTool List of Ciphers
http://www.cryptool-online.org/index.php?option=com_content&view=article...

Online puzzles

Puzzle Baron Cryptograms
http://www.cryptograms.org/

Reference

Most Common Letters, Digrams, and Trigrams in the English Language
http://academic.regis.edu/jseibert/Crypto/Fa2010/Subs/Frequency.pdf

WordDetector.com
http://worddetector.com/

2 Letter Words
http://www.yak.net/kablooey/scrabble/2letterwords.html

3 Letter Words
http://www.yak.net/kablooey/scrabble/3letterwords.html

Programming

Practical Cryptography
http://practicalcryptography.com/cryptanalysis/stochastic-searching/cryp...

Hacking Secret Ciphers With Python
http://inventwithpython.com/hacking/

An Intro To Crypto Programming Using Python
http://jdege.us/crypto-python/index.html

pycipher - Common classical ciphers implemented in Python
https://github.com/jameslyons/pycipher

Tools

Tools for Cryptography
http://www.ecrypt.eu.org/tools/overview

The CrypTool Portal
https://www.cryptool.org/en/

EverCrack (GPL) Open Source Cryptanalysis Engine
http://evercrack.sourceforge.net/

List of Cryptanalysis Tools
http://www.securityfocus.com/tools/category/54

Vigenère Ciphers

The Vigenere Cipher
http://user.it.uu.se/~olgag/Cryptology/vigenere.html

Vigenère Cipher Code
http://rosettacode.org/wiki/Vigen%C3%A8re_cipher#Python

PyGenere - Automatic Decoder/Solver
http://smurfoncrack.com/pygenere/pygenere.php

Vigenere Online Analysis and Cracking
http://f00l.de/hacking/vigenere.php

Vigenère Cipher Codebreaker
http://www.mygeocachingprofile.com/codebreaker.vigenerecipher.aspx

Sharky's Vigenere Cipher
http://sharkysoft.com/misc/vigenere/